PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008243167.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family NAC
Protein Properties Length: 427aa    MW: 48474.9 Da    PI: 4.6889
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008243167.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM103.52.8e-32581961128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk......leleev.ikev.diykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratk....sgyW 83 
                     lp+G++F+Ptd+e++++ L +k  +++      ++++ + +++  +i+ ++P++Lp +vk++ +  +fF+++ k+y+tg+rk+r+++    + +W
  XP_008243167.1  58 LPKGVKFDPTDQEIIWH-LIAKSGAEDlkphpfIDEFIItVDDDeGICCSHPHKLP-SVKQDGSASHFFHRAIKAYNTGTRKRRKIHdgdgDVRW 150
                     799************65.6566555554576554443333444336**********.778888999******************9883433446* PP

             NAM  84 katgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     ++tg++k+v+  +g + g+kk++v+y  +    k++kt+Wvmh+y+l
  XP_008243167.1 151 HKTGRTKPVML-DGVQRGCKKIMVLYmsTVGGGKPKKTNWVMHQYHL 196
                     ***********.99************5533555667*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.93E-3843215IPR003441NAC domain
PROSITE profilePS5100530.25558215IPR003441NAC domain
PfamPF023655.9E-1459196IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0000077Biological ProcessDNA damage checkpoint
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010332Biological Processresponse to gamma radiation
GO:0040020Biological Processregulation of meiotic nuclear division
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 427 aa     Download sequence    Send to blast
MAGPSWLVDK NRIATKIKSA SGTCDPERIK WQSNPTRACP NCQYTIDNSD VAQEWPGLPK  60
GVKFDPTDQE IIWHLIAKSG AEDLKPHPFI DEFIITVDDD EGICCSHPHK LPSVKQDGSA  120
SHFFHRAIKA YNTGTRKRRK IHDGDGDVRW HKTGRTKPVM LDGVQRGCKK IMVLYMSTVG  180
GGKPKKTNWV MHQYHLGTEE DEKDGEYVIS KIYYQQQQVK QADKTDQDLP ENFDLVITKV  240
DPVTPKSVTP EPPRTTSRDP FPQHPEMDQA EDEVHPEMDH AEDEVHPEFE KPDHYDQHNV  300
ENEADEVINN TENNAEEDPK WWDSESQNLL DSQQLVEGLS LCDDLLQSQS PIRAGHENGE  360
PAQVKPRLAD YAKLGPENLK KDLDECQNIV LDPANIMLED TPPDFRLSQL EFGSQESFLS  420
WGVKLAD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008243167.10.0PREDICTED: NAC domain-containing protein 8
SwissprotQ6NQK21e-176NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM5XB160.0M5XB16_PRUPE; Uncharacterized protein
STRINGVIT_01s0011g02990.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF56623354
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G25580.11e-168NAC family protein